GBMF Marine Phage Sequencing Project - SRA

SRX042471: GBMF Marine Phage Sequencing Project
1 LS454 (454 GS FLX Titanium) run: 76,254 spots, 45.2M bases, 96.1Mb downloads

UUID: c4062062-210c-4091-99e0-2b26bb9a88fb

Design: International collaboration to sequence, assemble, and annotate approximately 200 diverse marine phage/virus genomes and to sequence approximately 50 viral metagenomes from an array of marine environments. DNA sequencing using 454 technology.

Submitted by: Broad Institute (BI)

Study: Prochlorococcus phage P-SSM5 genome sequencing project

PRJNA47673 • SRP005734 • All experiments • All runs

Sample: Generic sample from Prochlorococcus phage P-SSM5

SAMN00215858 • SRS172789 • All experiments • All runs

Organism: Prochlorococcus phage P-SSM5

Library:

Name: 454-2788

Instrument: 454 GS FLX Titanium

Strategy: WGS

Source: GENOMIC

Selection: PCR

Layout: SINGLE

Spot descriptor:

barcode

Group tag	Basecalls
Luxembourg	AAGAGTTC

13 forward

Experiment attributes: (show all 6 attributes...) (hide...)

analysis_type: DNA Viral 454 Alignment and Assembly

gssr_id: 32996.1

lsid: BROAD:SEQUENCING_SAMPLE:32996.1

material_type: Viral cDNA

project: G2083

work_request: 19011

Pipeline: show...hide...

Name	Step	Program	Version
base caller	2009-05-04 13:38:55.0	454BaseCaller	2.0.00.22

Runs: 1 run, 76,254 spots, 45.2M bases, 96.1Mb

Run	# of Spots	# of Bases	Size	Published
SRR100481	76,254	45.2M	96.1Mb	2011-06-30

ID:: 50743

SRA

Sequence Read Archive

Result Filters

Send to:

Supplemental Content

Related information

Recent activity